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Literature summary for 1.3.7.15 extracted from
- Phylogeny of anoxygenic photosynthesis based on sequences of photosynthetic reaction center proteins and a key enzyme in bacteriochlorophyll biosynthesis, the chlorophyllide reductase (2019), Microorganisms, 7, 576 .
Cloned(Commentary)
| Cloned (Comment) | Organism |
|---|---|
| genes bchX, bchY, and bchZ, detailed phylogenetic analysis and tree of BchXYZ | Proteobacteria |
| genes bchX, bchY, and bchZ, detailed phylogenetic analysis and tree of BchXYZ | Chloroflexi |
| genes bchX, bchY, and bchZ, detailed phylogenetic analysis and tree of BchXYZ | Gemmatimonas phototrophica |
| genes bchX, bchY, and bchZ, detailed phylogenetic analysis and tree of BchXYZ | Heliomicrobium modesticaldum |
| genes bchX, bchY, and bchZ, detailed phylogenetic analysis and tree of BchXYZ | Chlorobi |
| genes bchX, bchY, and bchZ, detailed phylogenetic analysis and tree of BchXYZ | Chloracidobacterium thermophilum b |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Chloracidobacterium thermophilum b | - |
- |
- |
| Chlorobi | - |
- |
- |
| Chloroflexi | - |
- |
- |
| Gemmatimonas phototrophica | A0A143BJ63 AND A0A143BQ39 | genes bchX and bchY | - |
| Heliomicrobium modesticaldum | B0TBQ4 AND B0TBQ9 AND B0TBQ8 | genes bchX, bchY, and bchZ | - |
| Heliomicrobium modesticaldum ATCC 51547 | B0TBQ4 AND B0TBQ9 AND B0TBQ8 | genes bchX, bchY, and bchZ | - |
| Heliomicrobium modesticaldum Ice1 | B0TBQ4 AND B0TBQ9 AND B0TBQ8 | genes bchX, bchY, and bchZ | - |
| Proteobacteria | - |
- |
- |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| BchXYZ | - |
Proteobacteria |
| BchXYZ | - |
Chloroflexi |
| BchXYZ | - |
Gemmatimonas phototrophica |
| BchXYZ | - |
Heliomicrobium modesticaldum |
| BchXYZ | - |
Chlorobi |
| BchXYZ | - |
Chloracidobacterium thermophilum b |
| chlorophyllide reductase | - |
Proteobacteria |
| chlorophyllide reductase | - |
Chloroflexi |
| chlorophyllide reductase | - |
Gemmatimonas phototrophica |
| chlorophyllide reductase | - |
Heliomicrobium modesticaldum |
| chlorophyllide reductase | - |
Chlorobi |
| chlorophyllide reductase | - |
Chloracidobacterium thermophilum b |
| light-independent chlorophyllide reductase | - |
Proteobacteria |
| light-independent chlorophyllide reductase | - |
Chloroflexi |
| light-independent chlorophyllide reductase | - |
Gemmatimonas phototrophica |
| light-independent chlorophyllide reductase | - |
Heliomicrobium modesticaldum |
| light-independent chlorophyllide reductase | - |
Chlorobi |
| light-independent chlorophyllide reductase | - |
Chloracidobacterium thermophilum b |
General Information
| General Information | Comment | Organism |
|---|---|---|
| evolution | the light-independent chlorophyllide reductase BchXYZ is common to all anoxygenic phototrophic bacteria, including those with a type-I and those with a type-II photosynthetic reaction center. The phylogenetic analysis includes cultured phototrophic bacteria from several phyla, including Proteobacteria (138 species), Chloroflexi (five species), Chlorobi (six species), as well as Heliobacterium modesticaldum (Firmicutes), Chloracidobacterium acidophilum (Acidobacteria), and Gemmatimonas phototrophica (Gemmatimonadetes). Phylogenetic relationships based on a photosynthesis tree (PS tree, including sequences of PufHLM-BchXYZ) are compared with those of 16S rRNA gene sequences (RNS tree). Despite some significant differences, large parts are congruent between the 16S rRNA phylogeny and photosynthesis proteins. The phylogenetic relations demonstrate that bacteriochlorophyll biosynthesis had evolved in ancestors of phototrophic green bacteria much earlier as compared to phototrophic purple bacteria and that multiple events independently formed different lineages of aerobic phototrophic purple bacteria, many of which have very ancient roots. The Rhodobacterales clearly represent the youngest group, which is separated from other Proteobacteria by a large evolutionary gap | Proteobacteria |
| evolution | the light-independent chlorophyllide reductase BchXYZ is common to all anoxygenic phototrophic bacteria, including those with a type-I and those with a type-II photosynthetic reaction center. The phylogenetic analysis includes cultured phototrophic bacteria from several phyla, including Proteobacteria (138 species), Chloroflexi (five species), Chlorobi (six species), as well as Heliobacterium modesticaldum (Firmicutes), Chloracidobacterium acidophilum (Acidobacteria), and Gemmatimonas phototrophica (Gemmatimonadetes). Phylogenetic relationships based on a photosynthesis tree (PS tree, including sequences of PufHLM-BchXYZ) are compared with those of 16S rRNA gene sequences (RNS tree). Despite some significant differences, large parts are congruent between the 16S rRNA phylogeny and photosynthesis proteins. The phylogenetic relations demonstrate that bacteriochlorophyll biosynthesis had evolved in ancestors of phototrophic green bacteria much earlier as compared to phototrophic purple bacteria and that multiple events independently formed different lineages of aerobic phototrophic purple bacteria, many of which have very ancient roots. The Rhodobacterales clearly represent the youngest group, which is separated from other Proteobacteria by a large evolutionary gap | Chloroflexi |
| evolution | the light-independent chlorophyllide reductase BchXYZ is common to all anoxygenic phototrophic bacteria, including those with a type-I and those with a type-II photosynthetic reaction center. The phylogenetic analysis includes cultured phototrophic bacteria from several phyla, including Proteobacteria (138 species), Chloroflexi (five species), Chlorobi (six species), as well as Heliobacterium modesticaldum (Firmicutes), Chloracidobacterium acidophilum (Acidobacteria), and Gemmatimonas phototrophica (Gemmatimonadetes). Phylogenetic relationships based on a photosynthesis tree (PS tree, including sequences of PufHLM-BchXYZ) are compared with those of 16S rRNA gene sequences (RNS tree). Despite some significant differences, large parts are congruent between the 16S rRNA phylogeny and photosynthesis proteins. The phylogenetic relations demonstrate that bacteriochlorophyll biosynthesis had evolved in ancestors of phototrophic green bacteria much earlier as compared to phototrophic purple bacteria and that multiple events independently formed different lineages of aerobic phototrophic purple bacteria, many of which have very ancient roots. The Rhodobacterales clearly represent the youngest group, which is separated from other Proteobacteria by a large evolutionary gap | Gemmatimonas phototrophica |
| evolution | the light-independent chlorophyllide reductase BchXYZ is common to all anoxygenic phototrophic bacteria, including those with a type-I and those with a type-II photosynthetic reaction center. The phylogenetic analysis includes cultured phototrophic bacteria from several phyla, including Proteobacteria (138 species), Chloroflexi (five species), Chlorobi (six species), as well as Heliobacterium modesticaldum (Firmicutes), Chloracidobacterium acidophilum (Acidobacteria), and Gemmatimonas phototrophica (Gemmatimonadetes). Phylogenetic relationships based on a photosynthesis tree (PS tree, including sequences of PufHLM-BchXYZ) are compared with those of 16S rRNA gene sequences (RNS tree). Despite some significant differences, large parts are congruent between the 16S rRNA phylogeny and photosynthesis proteins. The phylogenetic relations demonstrate that bacteriochlorophyll biosynthesis had evolved in ancestors of phototrophic green bacteria much earlier as compared to phototrophic purple bacteria and that multiple events independently formed different lineages of aerobic phototrophic purple bacteria, many of which have very ancient roots. The Rhodobacterales clearly represent the youngest group, which is separated from other Proteobacteria by a large evolutionary gap | Heliomicrobium modesticaldum |
| evolution | the light-independent chlorophyllide reductase BchXYZ is common to all anoxygenic phototrophic bacteria, including those with a type-I and those with a type-II photosynthetic reaction center. The phylogenetic analysis includes cultured phototrophic bacteria from several phyla, including Proteobacteria (138 species), Chloroflexi (five species), Chlorobi (six species), as well as Heliobacterium modesticaldum (Firmicutes), Chloracidobacterium acidophilum (Acidobacteria), and Gemmatimonas phototrophica (Gemmatimonadetes). Phylogenetic relationships based on a photosynthesis tree (PS tree, including sequences of PufHLM-BchXYZ) are compared with those of 16S rRNA gene sequences (RNS tree). Despite some significant differences, large parts are congruent between the 16S rRNA phylogeny and photosynthesis proteins. The phylogenetic relations demonstrate that bacteriochlorophyll biosynthesis had evolved in ancestors of phototrophic green bacteria much earlier as compared to phototrophic purple bacteria and that multiple events independently formed different lineages of aerobic phototrophic purple bacteria, many of which have very ancient roots. The Rhodobacterales clearly represent the youngest group, which is separated from other Proteobacteria by a large evolutionary gap | Chlorobi |
| evolution | the light-independent chlorophyllide reductase BchXYZ is common to all anoxygenic phototrophic bacteria, including those with a type-I and those with a type-II photosynthetic reaction center. The phylogenetic analysis includes cultured phototrophic bacteria from several phyla, including Proteobacteria (138 species), Chloroflexi (five species), Chlorobi (six species), as well as Heliobacterium modesticaldum (Firmicutes), Chloracidobacterium thermophilum (representative of Acidobacteria phylum), and Gemmatimonas phototrophica (Gemmatimonadetes). Phylogenetic relationships based on a photosynthesis tree (PS tree, including sequences of PufHLM-BchXYZ) are compared with those of 16S rRNA gene sequences (RNS tree). Despite some significant differences, large parts are congruent between the 16S rRNA phylogeny and photosynthesis proteins. The phylogenetic relations demonstrate that bacteriochlorophyll biosynthesis had evolved in ancestors of phototrophic green bacteria much earlier as compared to phototrophic purple bacteria and that multiple events independently formed different lineages of aerobic phototrophic purple bacteria, many of which have very ancient roots. The Rhodobacterales clearly represent the youngest group, which is separated from other Proteobacteria by a large evolutionary gap | Chloracidobacterium thermophilum b |
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Release 2023.1 (January 2023)
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