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Literature summary for 1.14.20.4 extracted from

  • Rafique, M.Z.; Carvalho, E.; Stracke, R.; Palmieri, L.; Herrera, L.; Feller, A.; Malnoy, M.; Martens, S.
    Nonsense mutation inside anthocyanidin synthase gene controls pigmentation in yellow raspberry (Rubus idaeus L.) (2016), Front. Plant Sci., 7, 1892 .
    View publication on PubMedView publication on EuropePMC
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Cloned(Commentary)

Cloned (Comment) Organism
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 Rubus idaeus

Protein Variants

Protein Variants Comment Organism
additional information the mutation inside Ans gene in raspberry is responsible for yellow fruit phenotypes. An inactive ans allele in a yellow fruit raspberry (Anne) is identified. A 5 bp insertion in the coding region is identified and designated as ansC5. The insertion creates a premature stop codon resulting in a truncated protein of 264 amino acids, compared to 414 amino acids wild-type ANS protein. This mutation leads to loss of function of the encoded protein that might also result in transcriptional downregulation of Ans gene as a secondary effect, i.e., nonsense-mediated mRNA decay. Further, this mutation results in loss of visible and detectable anthocyanin pigments Rubus idaeus

Organism

Organism UniProt Comment Textmining
Rubus idaeus A0A1S5VYV1
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General Information

General Information Comment Organism
metabolism key enzyme in biosynthesis of anthocyanins Rubus idaeus