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Literature summary for 1.13.11.55 extracted from

  • Ruehl, P.; Poell, U.; Braun, J.; Klingl, A.; Kletzin, A.
    A sulfur oxygenase from the haloalkaliphilic bacterium Thioalkalivibrio paradoxus with atypically low reductase Activity (2017), J. Bacteriol., 199, e00675 .
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
gene AaSOR, phylogenetic analysis, recombinant expression of wild-type and mutant enzymes in Escherichia coli Aquifex aeolicus
phylogenetic analysis, synthetic gene encoding TpSOR, recombinant expression of wild-type and mutant enzymes in Escherichia coli Thioalkalivibrio paradoxus

Protein Variants

Protein Variants Comment Organism
C113A site-directed mutagenesis, almost inactive mutant Thioalkalivibrio paradoxus
C116A site-directed mutagenesis, almost inactive mutant Thioalkalivibrio paradoxus
C31A site-directed mutagenesis, inactive mutant Aquifex aeolicus
C44A site-directed mutagenesis, inactive mutant Thioalkalivibrio paradoxus

Inhibitors

Inhibitors Comment Organism Structure
glycine betaine 25% inhibition at 1 M NaCl, below 10% activity at 3 M, inactive at 4 M NaCl Thioalkalivibrio paradoxus
NaCl about 80% inhibition at 2 M NaCl, almost inactive at 3 M NaCl Aquifex aeolicus
NaCl 25% inhibition at 1 M NaCl, below 10% activity at 3 M, residual activities of 0.2% of the maximum at 5 M NaCl Thioalkalivibrio paradoxus

Metals/Ions

Metals/Ions Comment Organism Structure
Fe2+ low-potential mononuclear non-heme iron bound in the active site Thioalkalivibrio paradoxus
additional information TpSOR activity depends on osmolyte concentrations and not on salt Thioalkalivibrio paradoxus

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
556000
-
gel filtration, recombinant enzyme Thioalkalivibrio paradoxus
602000
-
gel filtration, recombinant enzyme Aquifex aeolicus

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
4 sulfur + 4 H2O + O2 Aquifex aeolicus
-
2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
4 sulfur + 4 H2O + O2 Thioalkalivibrio paradoxus
-
2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
4 sulfur + 4 H2O + O2 Thioalkalivibrio paradoxus Arh 1
-
2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?

Organism

Organism UniProt Comment Textmining
Aquifex aeolicus
-
-
-
Thioalkalivibrio paradoxus
-
-
-
Thioalkalivibrio paradoxus Arh 1
-
-
-

Purification (Commentary)

Purification (Comment) Organism
recombinant wild-type and mutant enzymes from Escherichia coli Aquifex aeolicus
recombinant wild-type and mutant enzymes from Escherichia coli Thioalkalivibrio paradoxus

Source Tissue

Source Tissue Comment Organism Textmining
additional information highest activity of cells at 35-37°C and pH 10.0 Thioalkalivibrio paradoxus
-
additional information highest activity of cells at 85°C and pH 6.8 Aquifex aeolicus
-

Specific Activity [micromol/min/mg]

Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
additional information
-
recombinant Thioalkalivibrio paradoxus SOR has a very low reductase activity and H2S production Thioalkalivibrio paradoxus
0.03
-
purified recombinant enzyme, pH 9.0, 80°C, reductase activity Thioalkalivibrio paradoxus
308 454 purified recombinant enzyme, pH 9.0, 80°C, thiosulfate- and sulfite-producing oxygenase activity Thioalkalivibrio paradoxus

Storage Stability

Storage Stability Organism
4°C, purified recombinant enzyme, up to 2 weeks without significant loss of activity, inactivation of the enzyme after 12 weeks, the inactive enzyme shows complete unfolding of the protein Thioalkalivibrio paradoxus

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4 sulfur + 4 H2O + O2
-
Aquifex aeolicus 2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
4 sulfur + 4 H2O + O2
-
Thioalkalivibrio paradoxus 2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
4 sulfur + 4 H2O + O2 discoloration of 2,6-dichlorophenolindophenol (DCPIP) by H2S is followed as an alternative detection method Aquifex aeolicus 2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
4 sulfur + 4 H2O + O2 discoloration of 2,6-dichlorophenolindophenol (DCPIP) by H2S is followed as an alternative detection method Thioalkalivibrio paradoxus 2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
4 sulfur + 4 H2O + O2
-
Thioalkalivibrio paradoxus Arh 1 2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
4 sulfur + 4 H2O + O2 discoloration of 2,6-dichlorophenolindophenol (DCPIP) by H2S is followed as an alternative detection method Thioalkalivibrio paradoxus Arh 1 2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
additional information at 50°C, nonenzymatic sulfur disproportionation is observed at pH 11 and above. At pH 12, the enzyme activity cannot be distinguished from the background anymore. At 50°C, sulfite exceeds thiosulfate production at all pH value, at 80°C, the main product is thiosulfate with only minor amounts of sulfite (maximum 6%) Thioalkalivibrio paradoxus ?
-
?
additional information at 50°C, nonenzymatic sulfur disproportionation is observed at pH 11 and above. At pH 12, the enzyme activity cannot be distinguished from the background anymore. At 50°C, sulfite exceeds thiosulfate production at all pH value, at 80°C, the main product is thiosulfate with only minor amounts of sulfite (maximum 6%) Thioalkalivibrio paradoxus Arh 1 ?
-
?

Subunits

Subunits Comment Organism
More All SORs seem to form highly thermostable 24-subunit hollow spheres Thioalkalivibrio paradoxus
tetraicosamer 24 * 35287, sequence calculation Thioalkalivibrio paradoxus
tetraicosamer 24 * 37674, sequence calculation Aquifex aeolicus

Synonyms

Synonyms Comment Organism
AaSOR
-
Aquifex aeolicus
SOR
-
Aquifex aeolicus
SOR
-
Thioalkalivibrio paradoxus
sulfur oxygenase
-
Aquifex aeolicus
sulfur oxygenase
-
Thioalkalivibrio paradoxus
sulfur oxygenase reductase
-
Aquifex aeolicus
sulfur oxygenase reductase
-
Thioalkalivibrio paradoxus
TpSOR
-
Thioalkalivibrio paradoxus

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
80
-
recombinant enzyme Thioalkalivibrio paradoxus
85
-
recombinant enzyme Aquifex aeolicus

Temperature Range [°C]

Temperature Minimum [°C] Temperature Maximum [°C] Comment Organism
40 95 activity range, profile overview. 13.4% of maximal activity at 40°C, maximal activity at 80°C, at pH 9.0 Thioalkalivibrio paradoxus

Temperature Stability [°C]

Temperature Stability Minimum [°C] Temperature Stability Maximum [°C] Comment Organism
80
-
purified recombinant enzyme, a total of 55% of the TpSOR activity is lost after 25 min, and 99% is lost after 60 min Thioalkalivibrio paradoxus
85
-
purified recombinant enzyme, 45% residual activity after 1 h Aquifex aeolicus

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.2
-
assay at Aquifex aeolicus
9
-
recombinant enzyme Thioalkalivibrio paradoxus

pH Range

pH Minimum pH Maximum Comment Organism
5.5 8 activity range, profile overview, at 50°C Aquifex aeolicus
6.5 11.5 activity range, proflie overview, at 50°C Thioalkalivibrio paradoxus

General Information

General Information Comment Organism
physiological function the enzyme is involved in the dissimilatory oxidation of sulfur compounds, schematic overview. Sulfur oxygenase reductases (SORs) catalyze a dioxygen-dependent disproportionation reaction of elemental sulfur (S0, consisting mostly of cyclo-octasulfur) with sulfite, thiosulfate, and sulfide as detectable products Aquifex aeolicus
physiological function the enzyme is involved in the dissimilatory oxidation of sulfur compounds, schematic overview. Sulfur oxygenase reductases (SORs) catalyze a dioxygen-dependent disproportionation reaction of elemental sulfur (S0, consisting mostly of cyclo-octasulfur) with sulfite, thiosulfate, and sulfide as detectable products. Recombinant Thioalkalivibrio paradoxus SOR has a very low reductase activity and H2S production Thioalkalivibrio paradoxus