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D,D-2,6-diaminoheptanedioate
L-lysine + CO2
DD-2,6-diaminoheptanedioate
L-lysine + CO2
DD-2,6-diaminoheptanedioate is a reasonable substrate for DAPDC but with an about 100fold lower kcat/Km value than DL-DAP
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-
?
diaminopimelate
L-lysine + CO2
DL-2,6-diaminoheptanedioate
L-lysine + CO2
-
-
-
?
Lanthionine
?
-
slowly
-
-
?
meso-2,6-Diaminoheptanedioate
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
additional information
?
-
D,D-2,6-diaminoheptanedioate
L-lysine + CO2
-
-
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?
D,D-2,6-diaminoheptanedioate
L-lysine + CO2
-
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?
diaminopimelate
L-lysine + CO2
-
-
-
?
diaminopimelate
L-lysine + CO2
a step in the lysine biosynthetic pathway, overview
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-
?
diaminopimelate
L-lysine + CO2
-
-
-
?
diaminopimelate
L-lysine + CO2
a step in the lysine biosynthetic pathway, overview
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-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
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?
meso-2,6-Diaminoheptanedioate
?
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lysine biosynthesis
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?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
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?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
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?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
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?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
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?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
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?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
A0A1S0QVH4
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
A0A1S0QVH4
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
A0A1S0QVH4
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
A0A1S0QVH4
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
Chlamydomonas sp.
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-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
Clostridium spp.
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
final step in L-lysine biosynthesis
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?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
last step in L-lysine biosynthesis
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
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?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
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?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
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-
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ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
commercial meso-2,6-diaminoheptanedioate is a mixture of 50% DL-2,6-diaminoheptanedioate, 25% DD-2,6-diaminoheptanedioate and 25% LL-2,6-diaminoheptanedioate
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?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
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-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
Vibrio cholerae serotype O1 ATCC 39315 / El Tor Inaba N16961
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-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
additional information
?
-
A0A1S0QVH4
optimization of a simple quantitative assay for measuring DAPDC catalytic activity using saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, method, overview. SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
-
optimization of a simple quantitative assay for measuring DAPDC catalytic activity using saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, method, overview. SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
A0A1S0QVH4
usage of a quantitative assay for measuring DAPDC catalytic activity with saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
-
usage of a quantitative assay for measuring DAPDC catalytic activity with saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
A0A1S0QVH4
optimization of a simple quantitative assay for measuring DAPDC catalytic activity using saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, method, overview. SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
A0A1S0QVH4
usage of a quantitative assay for measuring DAPDC catalytic activity with saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
the position of the alpha15 helix in CgDAPDC and the residues located on the helix are crucial for determining the substrate specificities of the amino acid decarboxylases. Substrate binding mode of enzyme CgDAPDC, substrate binding site involves residues Arg302, Arg343, Tyr347, Glu375, Tyr404, Met408, and Tyr412
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-
?
additional information
?
-
-
the position of the alpha15 helix in CgDAPDC and the residues located on the helix are crucial for determining the substrate specificities of the amino acid decarboxylases. Substrate binding mode of enzyme CgDAPDC, substrate binding site involves residues Arg302, Arg343, Tyr347, Glu375, Tyr404, Met408, and Tyr412
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-
?
additional information
?
-
the position of the alpha15 helix in CgDAPDC and the residues located on the helix are crucial for determining the substrate specificities of the amino acid decarboxylases. Substrate binding mode of enzyme CgDAPDC, substrate binding site involves residues Arg302, Arg343, Tyr347, Glu375, Tyr404, Met408, and Tyr412
-
-
?
additional information
?
-
optimization of a simple quantitative assay for measuring DAPDC catalytic activity using saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, method, overview. SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
-
optimization of a simple quantitative assay for measuring DAPDC catalytic activity using saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, method, overview. SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
usage of a quantitative assay for measuring DAPDC catalytic activity with saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
-
usage of a quantitative assay for measuring DAPDC catalytic activity with saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
optimization of a simple quantitative assay for measuring DAPDC catalytic activity using saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, method, overview. SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
usage of a quantitative assay for measuring DAPDC catalytic activity with saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
-
the reaction catalyzed by diaminopimelate decarboxylase on D stereocenters could be a concerted, backside electrophilic substitution reaction with simultaneous CO2 loss from Calpha and proton donation to the backside of Calpha from Lys72
-
-
?
additional information
?
-
the reaction catalyzed by diaminopimelate decarboxylase on D stereocenters could be a concerted, backside electrophilic substitution reaction with simultaneous CO2 loss from Calpha and proton donation to the backside of Calpha from Lys72
-
-
?
additional information
?
-
optimization of a simple quantitative assay for measuring DAPDC catalytic activity using saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, method, overview. SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
-
optimization of a simple quantitative assay for measuring DAPDC catalytic activity using saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, method, overview. SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
usage of a quantitative assay for measuring DAPDC catalytic activity with saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
-
usage of a quantitative assay for measuring DAPDC catalytic activity with saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
optimization of a simple quantitative assay for measuring DAPDC catalytic activity using saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, method, overview. SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
usage of a quantitative assay for measuring DAPDC catalytic activity with saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
the reaction catalyzed by diaminopimelate decarboxylase on D stereocenters could be a concerted, backside electrophilic substitution reaction with simultaneous CO2 loss from Calpha and proton donation to the backside of Calpha from Lys72
-
-
?
additional information
?
-
usage of a quantitative assay for measuring DAPDC catalytic activity with saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
additional information
?
-
Vibrio cholerae serotype O1 ATCC 39315 / El Tor Inaba N16961
usage of a quantitative assay for measuring DAPDC catalytic activity with saccharopine dehydrogenase (SDH) from Saccharomyces cerevisiae as the coupling enzyme, SDH has optimal activity at 37°C, pH 8.0, and in Tris buffer
-
-
?
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
diaminopimelate
L-lysine + CO2
meso-2,6-Diaminoheptanedioate
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
diaminopimelate
L-lysine + CO2
-
-
-
?
diaminopimelate
L-lysine + CO2
a step in the lysine biosynthetic pathway, overview
-
-
?
diaminopimelate
L-lysine + CO2
a step in the lysine biosynthetic pathway, overview
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
?
-
lysine biosynthesis
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
A0A1S0QVH4
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
A0A1S0QVH4
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
A0A1S0QVH4
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
A0A1S0QVH4
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
final step in L-lysine biosynthesis
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
last step in L-lysine biosynthesis
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
?
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
-
-
-
ir
meso-2,6-Diaminoheptanedioate
L-Lysine + CO2
Vibrio cholerae serotype O1 ATCC 39315 / El Tor Inaba N16961
-
-
-
ir
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
1 - 7
D,D-2,6-diaminoheptanedioate
pH 7.8, 25°C
0.43
DL-2,6-Diaminoheptanedioate
in 100 mM TEA-HCl pH 7.8, temperature not specified in the publication
1.7
meso-2,6-diamininoheptanedioate
0.03 - 1.9
meso-2,6-diaminoheptanedioate
additional information
additional information
-
1.7
meso-2,6-diamininoheptanedioate
-
-
1.7
meso-2,6-diamininoheptanedioate
-
-
0.03
meso-2,6-diaminoheptanedioate
mutant enzyme I148L, in 100 mM Tris, pH 8.0
0.1
meso-2,6-diaminoheptanedioate
-
-
0.11
meso-2,6-diaminoheptanedioate
mutant enzyme I148F, in 100 mM Tris, pH 8.0
0.166
meso-2,6-diaminoheptanedioate
-
-
0.3
meso-2,6-diaminoheptanedioate
-
-
0.35
meso-2,6-diaminoheptanedioate
mutant enzyme I148A, in 100 mM Tris, pH 8.0
0.36
meso-2,6-diaminoheptanedioate
mutant enzyme I148G, in 100 mM Tris, pH 8.0
0.36
meso-2,6-diaminoheptanedioate
mutant enzyme I148K, in 100 mM Tris, pH 8.0
0.39
meso-2,6-diaminoheptanedioate
wild type enzyme, in 100 mM Tris, pH 8.0
0.4
meso-2,6-diaminoheptanedioate
pH 7.8, 25°C
0.68
meso-2,6-diaminoheptanedioate
A0A1S0QVH4
pH 8.0, 37°C, recombinant enzyme
0.68
meso-2,6-diaminoheptanedioate
-
pH 8.0, 37°C, recombinant enzyme
0.72
meso-2,6-diaminoheptanedioate
mutant enzyme I148D, in 100 mM Tris, pH 8.0
0.97
meso-2,6-diaminoheptanedioate
pH 8.0, 37°C, recombinant enzyme
0.97
meso-2,6-diaminoheptanedioate
-
pH 8.0, 37°C, recombinant enzyme
1
meso-2,6-diaminoheptanedioate
-
-
1.6
meso-2,6-diaminoheptanedioate
pH 8.0, 37°C, recombinant enzyme
1.62
meso-2,6-diaminoheptanedioate
pH 8.0, 37°C, recombinant enzyme
1.9
meso-2,6-diaminoheptanedioate
pH 8.0, 37°C, recombinant enzyme
additional information
additional information
Michaelis-Menten kinetics, recombinant enzyme
-
additional information
additional information
-
Michaelis-Menten kinetics, recombinant enzyme
-
additional information
additional information
Michaelis-Menten kinetics, recombinant enzyme
-
additional information
additional information
-
Michaelis-Menten kinetics, recombinant enzyme
-
additional information
additional information
A0A1S0QVH4
Michaelis-Menten kinetics, recombinant enzyme
-
additional information
additional information
-
Michaelis-Menten kinetics, recombinant enzyme
-
additional information
additional information
Michaelis-Menten kinetics, recombinant enzyme
-
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1.8
D,D-2,6-diaminoheptanedioate
pH 7.8, 25°C
1.8
DD-2,6-diaminoheptanedioate
in 100 mM TEA-HCl pH 7.8, temperature not specified in the publication
7.1
DL-2,6-Diaminoheptanedioate
in 100 mM TEA-HCl pH 7.8, temperature not specified in the publication
0.07 - 58
meso-2,6-diaminoheptanedioate
0.07
meso-2,6-diaminoheptanedioate
mutant enzyme I148D, in 100 mM Tris, pH 8.0
0.07
meso-2,6-diaminoheptanedioate
mutant enzyme I148G, in 100 mM Tris, pH 8.0
0.28
meso-2,6-diaminoheptanedioate
mutant enzyme I148K, in 100 mM Tris, pH 8.0
0.33
meso-2,6-diaminoheptanedioate
mutant enzyme I148A, in 100 mM Tris, pH 8.0
0.38
meso-2,6-diaminoheptanedioate
mutant enzyme I148L, in 100 mM Tris, pH 8.0
0.68
meso-2,6-diaminoheptanedioate
mutant enzyme I148F, in 100 mM Tris, pH 8.0
2 - 8
meso-2,6-diaminoheptanedioate
pH 8.0, 37°C, recombinant enzyme
2 - 8
meso-2,6-diaminoheptanedioate
-
pH 8.0, 37°C, recombinant enzyme
7.1
meso-2,6-diaminoheptanedioate
pH 7.8, 25°C
7.1
meso-2,6-diaminoheptanedioate
in 100 mM TEA-HCl pH 7.8, temperature not specified in the publication
15.65
meso-2,6-diaminoheptanedioate
wild type enzyme, in 100 mM Tris, pH 8.0
22
meso-2,6-diaminoheptanedioate
pH 8.0, 37°C, recombinant enzyme
55
meso-2,6-diaminoheptanedioate
pH 8.0, 37°C, recombinant enzyme
55
meso-2,6-diaminoheptanedioate
-
pH 8.0, 37°C, recombinant enzyme
58
meso-2,6-diaminoheptanedioate
A0A1S0QVH4
pH 8.0, 37°C, recombinant enzyme
58
meso-2,6-diaminoheptanedioate
-
pH 8.0, 37°C, recombinant enzyme
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metabolism
diaminopimelate decarboxylase (DAPDC) catalyzes the conversion of meso-2,6-diaminopimelate to lysine and carbon dioxide in the final step of the diaminopimelate (DAP) pathway
metabolism
diaminopimelate decarboxylase (DAPDC) catalyzes the conversion of meso-2,6-diaminopimelate to lysine and carbon dioxide in the final step of the diaminopimelate (DAP) pathway
metabolism
A0A1S0QVH4
diaminopimelate decarboxylase (DAPDC) catalyzes the conversion of meso-2,6-diaminopimelate to lysine and carbon dioxide in the final step of the diaminopimelate (DAP) pathway
metabolism
enzyme meso-diaminopimelic acid decarboxylase (DAPDC) catalyzes the final step in the de novo L-lysine biosynthetic pathway by converting meso-diaminopimelic acid (meso-DAP) into L-lysine by decarboxylation reaction
metabolism
the enzyme catalyzes the irreversible and stereospecific decarboxylation of meso-diaminopimelate (meso-DAP) in the final step of the diaminopimelate (DAP) biosynthesis pathway
metabolism
the enzyme catalyzes the irreversible and stereospecific decarboxylation of meso-diaminopimelate (meso-DAP) in the final step of the diaminopimelate (DAP) biosynthesis pathway
metabolism
A0A1S0QVH4
the enzyme catalyzes the irreversible and stereospecific decarboxylation of meso-diaminopimelate (meso-DAP) in the final step of the diaminopimelate (DAP) biosynthesis pathway
metabolism
the enzyme catalyzes the irreversible and stereospecific decarboxylation of meso-diaminopimelate (meso-DAP) in the final step of the diaminopimelate (DAP) biosynthesis pathway
metabolism
-
diaminopimelate decarboxylase (DAPDC) catalyzes the conversion of meso-2,6-diaminopimelate to lysine and carbon dioxide in the final step of the diaminopimelate (DAP) pathway
-
metabolism
-
the enzyme catalyzes the irreversible and stereospecific decarboxylation of meso-diaminopimelate (meso-DAP) in the final step of the diaminopimelate (DAP) biosynthesis pathway
-
metabolism
-
diaminopimelate decarboxylase (DAPDC) catalyzes the conversion of meso-2,6-diaminopimelate to lysine and carbon dioxide in the final step of the diaminopimelate (DAP) pathway
-
metabolism
-
the enzyme catalyzes the irreversible and stereospecific decarboxylation of meso-diaminopimelate (meso-DAP) in the final step of the diaminopimelate (DAP) biosynthesis pathway
-
metabolism
-
enzyme meso-diaminopimelic acid decarboxylase (DAPDC) catalyzes the final step in the de novo L-lysine biosynthetic pathway by converting meso-diaminopimelic acid (meso-DAP) into L-lysine by decarboxylation reaction
-
metabolism
Vibrio cholerae serotype O1 ATCC 39315 / El Tor Inaba N16961
-
the enzyme catalyzes the irreversible and stereospecific decarboxylation of meso-diaminopimelate (meso-DAP) in the final step of the diaminopimelate (DAP) biosynthesis pathway
-
metabolism
-
diaminopimelate decarboxylase (DAPDC) catalyzes the conversion of meso-2,6-diaminopimelate to lysine and carbon dioxide in the final step of the diaminopimelate (DAP) pathway
-
metabolism
-
the enzyme catalyzes the irreversible and stereospecific decarboxylation of meso-diaminopimelate (meso-DAP) in the final step of the diaminopimelate (DAP) biosynthesis pathway
-
physiological function
the product of the reaction, L-lysine, is an important building block for the biosynthesis of the peptidoglycan cell wall, housekeeping proteins, and virulence factors of bacteria
physiological function
the product of the reaction, L-lysine, is an important building block for the biosynthesis of the peptidoglycan cell wall, housekeeping proteins, and virulence factors of bacteria
physiological function
A0A1S0QVH4
the product of the reaction, L-lysine, is an important building block for the biosynthesis of the peptidoglycan cell wall, housekeeping proteins, and virulence factors of bacteria
physiological function
the product of the reaction, L-lysine, is an important building block for the biosynthesis of the peptidoglycan cell wall, housekeeping proteins, and virulence factors of bacteria
physiological function
-
the product of the reaction, L-lysine, is an important building block for the biosynthesis of the peptidoglycan cell wall, housekeeping proteins, and virulence factors of bacteria
-
physiological function
-
the product of the reaction, L-lysine, is an important building block for the biosynthesis of the peptidoglycan cell wall, housekeeping proteins, and virulence factors of bacteria
-
physiological function
Vibrio cholerae serotype O1 ATCC 39315 / El Tor Inaba N16961
-
the product of the reaction, L-lysine, is an important building block for the biosynthesis of the peptidoglycan cell wall, housekeeping proteins, and virulence factors of bacteria
-
physiological function
-
the product of the reaction, L-lysine, is an important building block for the biosynthesis of the peptidoglycan cell wall, housekeeping proteins, and virulence factors of bacteria
-
additional information
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis
additional information
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis
additional information
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis
additional information
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis
additional information
A0A1S0QVH4
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis
additional information
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis
additional information
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis
additional information
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis
-
additional information
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis
-
additional information
Vibrio cholerae serotype O1 ATCC 39315 / El Tor Inaba N16961
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis
-
additional information
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis
-
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?
x * 53600, about, sequence calculation
?
-
x * 47000, estimated from amino acid sequence
?
-
x * 50290, recombinant protein, estimated from SDS-PAGE
?
-
x * 47000, estimated from amino acid sequence
-
?
-
x * 50290, recombinant protein, estimated from SDS-PAGE
-
?
-
x * 50000, mass spectrometry
?
x * 53200, about, sequence calculation
dimer
A0A1S0QVH4
2 * 40000, about, SDS-PAGE
dimer
-
2 * 40000, about, SDS-PAGE
-
dimer
2 * 47400, recombinant His6-tagged enzyme, SDS-PAGE
dimer
-
2 * 47400, recombinant His6-tagged enzyme, SDS-PAGE
-
dimer
2 * 47400, about, SDS-PAGE
dimer
-
2 * 47400, about, SDS-PAGE
-
dimer
2 * 50000, about, SDS-PAGE
dimer
-
2 * 50000, about, SDS-PAGE
-
dimer
2 * 50000, wild-type enzyme, about, SDS-PAGE, 2 x 49000, recombinant mutants N381A and R385A, SDS-PAGE
dimer
Vibrio cholerae serotype O1 ATCC 39315 / El Tor Inaba N16961
-
2 * 50000, wild-type enzyme, about, SDS-PAGE, 2 x 49000, recombinant mutants N381A and R385A, SDS-PAGE
-
homodimer
DAPDC is predominantly dimeric in solution
homodimer
-
DAPDC is predominantly dimeric in solution
-
homotetramer
an equilibrium may exist between the dimeric and the tetrameric form, X-ray crystallography
homotetramer
-
an equilibrium may exist between the dimeric and the tetrameric form, X-ray crystallography
-
additional information
A0A1S0QVH4
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis, secondary and quaternary structure analysis of soluble recombinant enzyme, analysis by SDS-PAGE, fluorescence-detected analytical ultracentrifugation, mass spectrometry, and circular dichroism spectroscopy, detailed overview
additional information
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis, secondary and quaternary structure analysis of soluble recombinant enzyme, analysis by SDS-PAGE, fluorescence-detected analytical ultracentrifugation, mass spectrometry, and circular dichroism spectroscopy, detailed overview
additional information
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis, secondary and quaternary structure analysis of soluble recombinant enzyme, analysis by SDS-PAGE, fluorescence-detected analytical ultracentrifugation, mass spectrometry, and circular dichroism spectroscopy, detailed overview
-
additional information
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis, secondary and quaternary structure analysis of soluble recombinant enzyme, analysis by SDS-PAGE, fluorescence-detected analytical ultracentrifugation, mass spectrometry, and circular dichroism spectroscopy, detailed overview
additional information
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis, secondary and quaternary structure analysis of soluble recombinant enzyme, analysis by SDS-PAGE, fluorescence-detected analytical ultracentrifugation, mass spectrometry, and circular dichroism spectroscopy, detailed overview
additional information
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis, secondary and quaternary structure analysis of soluble recombinant enzyme, analysis by SDS-PAGE, fluorescence-detected analytical ultracentrifugation, mass spectrometry, and circular dichroism spectroscopy, detailed overview
-
additional information
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis, secondary and quaternary structure analysis of soluble recombinant enzyme, analysis by SDS-PAGE, fluorescence-detected analytical ultracentrifugation, mass spectrometry, and circular dichroism spectroscopy, detailed overview
additional information
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis, secondary and quaternary structure analysis of soluble recombinant enzyme, analysis by SDS-PAGE, fluorescence-detected analytical ultracentrifugation, mass spectrometry, and circular dichroism spectroscopy, detailed overview
additional information
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis, secondary and quaternary structure analysis of soluble recombinant enzyme, analysis by SDS-PAGE, fluorescence-detected analytical ultracentrifugation, mass spectrometry, and circular dichroism spectroscopy, detailed overview
-
additional information
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis, secondary and quaternary structure analysis of soluble recombinant enzyme, analysis by SDS-PAGE, fluorescence-detected analytical ultracentrifugation, mass spectrometry, and circular dichroism spectroscopy, detailed overview
additional information
Vibrio cholerae serotype O1 ATCC 39315 / El Tor Inaba N16961
-
dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis, secondary and quaternary structure analysis of soluble recombinant enzyme, analysis by SDS-PAGE, fluorescence-detected analytical ultracentrifugation, mass spectrometry, and circular dichroism spectroscopy, detailed overview
-
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Chatterjee, S.P.; White, P.J.
Activities and regulation of the enzymes of lysine biosynthesis in a lysine-excreting strain of Bacillus megaterium
J. Gen. Microbiol.
128
1073-1081
1982
Priestia megaterium
-
brenda
Chatterjee, S.P.; Singh, B.K.; Gilvarg, C.
Biosynthesis of lysine in plants: the putative role of meso-diaminopimelate dehydrogenase
Plant Mol. Biol.
26
285-290
1994
Chlamydomonas sp., Glycine max, Nicotiana tabacum, Zea mays
brenda
Denman, R.F.; Hoare, D.S.; Work, E.
Diaminopimelic acid decarboxylase in pyridoxin-deficient Escherichia coli
Biochim. Biophys. Acta
16
442-443
1955
Escherichia coli
brenda
Vogel, H.J.; Hirvonen, A.P.
Diaminopimelate decarboxylase
Methods Enzymol.
17B
146-150
1971
Lemna perpusilla, Landoltia punctata
-
brenda
White, P.J.
Diaminopimelate decarboxylase (Escherichia coli)
Methods Enzymol.
17B
140-145
1971
Escherichia coli
-
brenda
Rosner, A.
Control of lysine biosynthesis in Bacillis subtilis: inhibition of diaminopimelate decarboxylase by lysine
J. Bacteriol.
121
20-28
1975
Bacillus subtilis, Brevibacterium sp.
brenda
Mazelis, M.N.; Miflin, B.J.; Prati, H.M.
A chloroplast-localized diaminopimelate decarboxylase in higher plants
FEBS Lett.
64
197-200
1976
Vicia faba
brenda
Schroder, D.; Wolfel, L.; Schoeter, A.; Mach, F.
Lysinbiosynthese bei Pseudomonas aeruginosa PAO 1:1. Einfluss von Cetyl-trimethyl-ammoniumbromid auf P. aeruginosa PAO 1 bei der Bestimmung der DAP-Decarboxylaseaktivitt
Z. Allg. Mikrobiol.
18
361-364
1978
Pseudomonas aeruginosa
brenda
Schroeder, D.; Woelfel, L.; Schroeter, A.; Mach, F.
Lysinbiosynthese bei Pseudomonas aeruginosa PAO 1 II. Erste Untersuchungen der DAP-Decarboxylase Lysin-auxotropher Mutanten von P. aeruginosa PAO 1
Z. Allg. Mikrobiol.
18
453-456
1978
Pseudomonas aeruginosa
brenda
Asada, Y.; Tanizawa, K.; Kawabata, Y.; Misuno, H.; Soda, K.
Purification and properties of meso-alpha,epsilon-diaminopimelate decarboxylase from Bacillus sphaericus
Agric. Biol. Chem.
45
1513-1514
1981
Lysinibacillus sphaericus
-
brenda
Asada, Y.; Tanizawa, K.; Sawada, S.; Suzuki, T.; Misono, H.; Soda, K.
Stereochemistry of meso-'a,e'-diaminopimelate decarboxylase reaction: the first evidence for pyridoxal 5'phosphate dependent decarboxylation with inversion of configuration
Biochemistry
20
6881-6886
1981
Lysinibacillus sphaericus
brenda
Dierks-Ventling, C.
Lysine biosynthesis and utilization during seed development of normal and opaque-2 Zea mays L.
Planta
157
233-238
1983
Zea mays
brenda
Sen, S.K.; Chatterjee, M.; Chatterjee, S.P.; Banerjee, A.K.
Activity of diaminopimelic acid decarboxylase in bacteria producing lysine
Acta Biotechnol.
3
217-220
1983
Arthrobacter globiformis, Corynebacterium glutamicum, Enterococcus faecalis, Micrococcus luteus, Staphylococcus aureus, Kocuria varians
-
brenda
Bakhiet, N.; Forney, F.W.; Stahly, D.P.; Daniels, L.
Lysine biosynthesis in Methanobacterium thermoautotrophicum is by the diaminopimelic acid pathway
Curr. Microbiol.
10
195-198
1984
Methanothermobacter thermautotrophicus, Methanospirillum hungatei
-
brenda
Jouanneau, J.; Stragier, P.; Bouvier, J.; Patte, J.C.; Yaniv, M.
Expression in mammalian cells of the diaminopimelic acid decarboxylase of Escherichia coli permits cell growth in lysine-free medium
Eur. J. Biochem.
145
175-178
1985
Escherichia coli
-
brenda
Kelland, J.C.; Palcic, M.M.; Pickard, M.A.; Vederas, J.C.
Stereochemistry of lysine formation by meso-diaminopimelate decarboxylase from wheat germ: use of 1H-13C NMR shift correlation to detect stereospecific deuterium labeling
Biochemistry
24
3263-3267
1985
Triticum sp.
brenda
Kelland, J.C.; Arnold, L.D.; Palcic, M.M.; Pickard, M.A.; Vederas, J.C.
Analogs of diaminopimelic acid as inhibitors of meso-diaminopimelate decarboxylase from Bacillus sphaericus and wheat germ
J. Biol. Chem.
261
13216-13223
1986
Lysinibacillus sphaericus, Triticum sp.
brenda
Yeh, P.; Sicard, A.M.; Sinskey, A.J.
General organization of the genes specifically involved in the diaminopimelate-lysine biosynthetic pathway of Corynebacterium glutamicum
Mol. Gen. Genet.
212
105-111
1988
Corynebacterium glutamicum
brenda
Styriak, I.; Timashova-Kalcheva, E.O.; Kmet, V.; Maljuta, S.S.
DAP-decarboxylase activity and lysine production by rumen bacteria
Arch. Anim. Nutr.
42
71-77
1992
Fibrobacter succinogenes, Butyrivibrio fibrisolvens, Clostridium spp., Megasphaera elsdenii, Selenomonas ruminantium, Streptococcus equinus
brenda
White, P.J.
The regulation of diaminopimelate decarboxylase activity in Escherichia coli strain W
J. Gen. Microbiol.
96
51-62
1976
Escherichia coli
brenda
Mills, D.A.et al.
Cloning and sequence analysis of the meso-diaminopimelate decarboxylase gene from Bacillus methanolicus MGA 3 and comparison to other decarboxylase genes
Appl. Environ. Microbiol.
59
2927-2937
1993
Bacillus methanolicus
brenda
Momany, C.; Levdikov, V.; Blagova, L.; Crews, K.
Crystallization of diaminopimelate decarboxylase from Escherichia coli, a stereospecific D-amino-acid decarboxylase
Acta Crystallogr. Sect. D
58
549-552
2002
Escherichia coli
brenda
Gokulan, K.; Rupp, B.; Pavelka, M.S., Jr.; Jacobs, W.R., Jr.; Sacchettini, J.C.
Crystal structure of Mycobacterium tuberculosis diaminopimelate decarboxylase, an essential enzyme in bacterial lysine biosynthesis
J. Biol. Chem.
278
18588-18596
2003
Mycobacterium tuberculosis (P9WIU7), Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv (P9WIU7)
brenda
Ray, S.S.; Bonanno, J.B.; Rajashankar, K.R.; Pinho, M.G.; He, G.; De Lencastre, H.; Tomasz, A.; Burley, S.K.
Cocrystal structures of diaminopimelate decarboxylase: mechanism, evolution, and inhibition of an antibiotic resistance accessory factor
Structure
10
1499-1508
2002
Methanocaldococcus jannaschii
brenda
Kefala, G.; Perry, L.J.; Weiss, M.S.
Cloning, expression, purification, crystallization and preliminary x-ray diffraction analysis of LysA (Rv1293) from Mycobacterium tuberculosis
Acta Crystallogr. Sect. F
F61
782-784
2005
Mycobacterium tuberculosis
brenda
Gunji, Y.; Tsujimoto, N.; Shimaoka, M.; Ogawa-Miyata, Y.; Sugimoto, S.; Yasueda, H.
Characterization of the L-lysine biosynthetic pathway in the obligate methylotroph Methylophilus methylotrophus
Biosci. Biotechnol. Biochem.
68
1449-1460
2004
Methylophilus methylotrophus
brenda
Kim, J.
Diaminopimelate decarboxylase from Arabidopsis contains motifs for pyridoxal-5'-phosphate and substrate
Asian J. Plant Sci.
5
260-265
2006
Arabidopsis thaliana (Q949X7), Arabidopsis thaliana (Q94A94)
-
brenda
Kim, J.; Lee, S.
Characterization of a gene encoding diaminopimelate decarboxylase from rice
Integr. Biosci.
10
197-201
2006
Oryza sativa (Q6ZG77)
-
brenda
Hu, T.; Wu, D.; Chen, J.; Ding, J.; Jiang, H.; Shen, X.
The catalytic intermediate stabilized by a "down" active site loop for diaminopimelate decarboxylase from Helicobacter pylori. Enzymatic characterization with crystal structure analysis
J. Biol. Chem.
283
21284-21293
2008
Helicobacter pylori (P56129), Helicobacter pylori
brenda
Weyand, S.; Kefala, G.; Svergun, D.I.; Weiss, M.S.
The three-dimensional structure of diaminopimelate decarboxylase from Mycobacterium tuberculosis reveals a tetrameric enzyme organisation
J. Struct. Funct. Genomics
10
209-217
2009
Mycobacterium tuberculosis (P9WIU7), Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv (P9WIU7)
brenda
Fogle, E.J.; Toney, M.D.
Analysis of catalytic determinants of diaminopimelate and ornithine decarboxylases using alternate substrates
Biochim. Biophys. Acta
1814
1113-1119
2011
Mycobacterium tuberculosis, Mycobacterium tuberculosis (P9WIU7), Mycobacterium tuberculosis H37Rv (P9WIU7)
brenda
Cheraghi, S.; Akbarzade, A.; Farhangi, A.; Chiani, M.; Saffari, Z.; Ghassemi, S.; Rastegari, H.; Mehrabi, M.
Improved production of L-lysine by over-expression of meso-diaminopimelate decarboxylase enzyme of Corynebacterium glutamicum in Escherichia coli
Pak. J. Biol. Sci.
13
504-508
2010
Corynebacterium glutamicum, Corynebacterium glutamicum ATC21799
brenda
Oliver, M.R.; Crowther, J.M.; Leeman, M.M.; Kessans, S.A.; North, R.A.; Donovan, K.A.; Griffin, M.D.; Suzuki, H.; Hudson, A.O.; Kasanmascheff, M.; Dobson, R.C.
The purification, crystallization and preliminary X-ray diffraction analysis of two isoforms of meso-diaminopimelate decarboxylase from Arabidopsis thaliana
Acta Crystallogr. Sect. F
70
663-668
2014
Arabidopsis thaliana (Q949X7), Arabidopsis thaliana (Q94A94), Arabidopsis thaliana
brenda
Son, H.F.; Kim, K.J.
Structural basis for substrate specificity of meso-diaminopimelic acid decarboxylase from Corynebacterium glutamicum
Biochem. Biophys. Res. Commun.
495
1815-1821
2018
Corynebacterium glutamicum (P09890), Corynebacterium glutamicum, Corynebacterium glutamicum ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025 (P09890)
brenda
Peverelli, M.G.; Perugini, M.A.
An optimized coupled assay for quantifying diaminopimelate decarboxylase activity
Biochimie
115
78-85
2015
no activity in Homo sapiens, Bacillus anthracis (A0A1S0QVH4), Bacillus anthracis, Escherichia coli (P00861), Escherichia coli, Mycobacterium tuberculosis (P9WIU7), Mycobacterium tuberculosis, Bacillus anthracis Sterne (A0A1S0QVH4), Mycobacterium tuberculosis ATCC 25618 / H37Rv (P9WIU7), Escherichia coli K-12 / MG1655 (P00861)
brenda
Peverelli, M.G.; Soares da Costa, T.P.; Kirby, N.; Perugini, M.A.
Dimerization of bacterial diaminopimelate decarboxylase is essential for catalysis
J. Biol. Chem.
291
9785-9795
2016
Bacillus anthracis (A0A1S0QVH4), Bacillus anthracis, Escherichia coli (P00861), Escherichia coli, Mycobacterium tuberculosis (P9WIU7), Mycobacterium tuberculosis, Vibrio cholerae serotype O1 (Q9KVL7), Bacillus anthracis Sterne (A0A1S0QVH4), Mycobacterium tuberculosis ATCC 25618 / H37Rv (P9WIU7), Vibrio cholerae serotype O1 ATCC 39315 / El Tor Inaba N16961 (Q9KVL7), Escherichia coli K-12 / MG1655 (P00861)
brenda